choros: correction of sequence-based biases for accurate quantification of ribosome profiling data

Mok et al. bioRxiv 2023

tidyqpcr: Quantitative PCR analysis in the tidyverse

Wallace et al. JOSE 2022

Limitations of composability of cis-regulatory elements in messenger RNA

Auxillos, Haynes, et al. bioRxiv 2022

riboviz 2: A flexible and robust ribosome profiling data analysis and visualization workflow

Cope et al. Bioinformatics 2022

Post-transcriptional control of fungal cell wall synthesis

Fungal Cell Walls, The Cell Surface 2022

The benefits of an open-science approach in student research projects

Open Student Projects, The Biochemist 2021

Yeast Ssd1 is a non-enzymatic member of the RNase II family with an alternative RNA recognition interface

Bayne et al. NAR 2021

Using prototyping to choose a bioinformatics workflow management system

Jackson et al. PLoS Comput. Biol 2021

Repeated evolution of inactive pseudonucleases in a fungal branch of the Dis3/RNase II family of nucleases

Ballou et al. MBE 2020

Daily cycles of reversible protein condensation in cyanobacteria

Pattanayak et al. Cell Reports 2020

Quantitative global studies reveal differential translational control by start codon context across the fungal kingdom

Wallace et al. NAR 2020

riboviz: analysis and visualization of ribosome profiling datasets.

Carja et al. BMC 2017

Extremely fast and incredibly close: co-transcriptional splicing in budding yeast

Wallace and Beggs RNA 2017

Reversible, specific, active aggregates of endogenous proteins assemble upon heat stress

Wallace et al. Cell 2015

Dying mRNA tells a story of its life

Wallace and Drummond Cell 2015

A nutrient-driven tRNA modification alters translational fidelity and genome-wide protein coding across an animal genus

Zaborske et al. PLOS Biology 2014

A Model for the Evolution of Biological Specificity: a Cross-Reacting DNA-Binding Protein Causes Plasmid Incompatibility

Hyland et al. J. Bacteriology 2014

Estimating selection on synonymous codon usage from noisy experimental data

Wallace et al. Mol Biol Evol 2013