PREPRINT: The fungal RNA-binding protein Ssd1 represses Sun4 protein abundance through recognition of 5′ UTR structural and sequence elements

Kleinerman, Jayachandran, et al., bioRxiv 2026

Protein secretion routes in fungi are predicted by the length of the hydrophobic helix in the signal sequence

Sones-Dykes and Wallace G3 2026

Transcriptome-wide mRNP condensation precedes stress granule formation and excludes new mRNAs

G/B/WH et al. 2024

Translon: a single term for translated regions

Świrski, Baranov, et al, Nature Methods 2025

PREPRINT: Antifungal exposure can enhance Candida glabrata pathogenesis

Ribeiro et al., bioRxiv 2025

The GATA-like transcription factor Gat201 determines alkaline-restricted growth in Cryptococcus neoformans

Hughes, et al. mSphere 2025

The type of carbon source not the growth rate it supports can determine diauxie in *Saccharomyces cerevisiae*

Huo, et al. Communications Biology 2025

Improved gene editing and fluorescent-protein tagging in Aspergillus nidulans using a Golden Gate-based CRISPR-Cas9 plasmid system

Modaffari et al. 2024

Conserved signalling functions for Mps1, Mad1 and Mad2 in the Cryptococcus neoformans spindle checkpoint

Aktar et al. 2024

Evolutionary principles underpinning codon usage bias: patterns, functions, and mechanisms

Cope et al. 2024

Not all exons are protein coding: Addressing a common misconception

Aspden, Wallace, Whiffin. Cell Genomics 2023

choros: correction of sequence-based biases for accurate quantification of ribosome profiling data

Mok et al. bioRxiv 2023

tidyqpcr: Quantitative PCR analysis in the tidyverse

Wallace et al. JOSS 2022

PREPRINT: Limitations of composability of cis-regulatory elements in messenger RNA

Auxillos, Haynes, et al. bioRxiv 2022

riboviz 2: A flexible and robust ribosome profiling data analysis and visualization workflow

Cope et al. Bioinformatics 2022

Post-transcriptional control of fungal cell wall synthesis

Fungal Cell Walls, The Cell Surface 2022

The benefits of an open-science approach in student research projects

Open Student Projects, The Biochemist 2021

Yeast Ssd1 is a non-enzymatic member of the RNase II family with an alternative RNA recognition interface

Bayne et al. NAR 2022

Using prototyping to choose a bioinformatics workflow management system

Jackson et al. PLoS Comput. Biol 2021

Repeated evolution of inactive pseudonucleases in a fungal branch of the Dis3/RNase II family of nucleases

Ballou et al. MBE 2021

Daily cycles of reversible protein condensation in cyanobacteria

Pattanayak et al. Cell Reports 2020

Quantitative global studies reveal differential translational control by start codon context across the fungal kingdom

Wallace et al. NAR 2020

riboviz: analysis and visualization of ribosome profiling datasets.

Carja et al. BMC 2017

Extremely fast and incredibly close: co-transcriptional splicing in budding yeast

Wallace and Beggs RNA 2017

Reversible, specific, active aggregates of endogenous proteins assemble upon heat stress

Wallace et al. Cell 2015

Dying mRNA tells a story of its life

Wallace and Drummond Cell 2015

A nutrient-driven tRNA modification alters translational fidelity and genome-wide protein coding across an animal genus

Zaborske et al. PLOS Biology 2014

A Model for the Evolution of Biological Specificity: a Cross-Reacting DNA-Binding Protein Causes Plasmid Incompatibility

Hyland et al. J. Bacteriology 2014

Estimating selection on synonymous codon usage from noisy experimental data

Wallace et al. Mol Biol Evol 2013