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papers

Not all exons are protein coding: Addressing a common misconception
choros: correction of sequence-based biases for accurate quantification of ribosome profiling data
tidyqpcr: Quantitative PCR analysis in the tidyverse
Limitations of composability of cis-regulatory elements in messenger RNA
riboviz 2: A flexible and robust ribosome profiling data analysis and visualization workflow
Post-transcriptional control of fungal cell wall synthesis
The benefits of an open-science approach in student research projects
Yeast Ssd1 is a non-enzymatic member of the RNase II family with an alternative RNA recognition interface
Using prototyping to choose a bioinformatics workflow management system
Repeated evolution of inactive pseudonucleases in a fungal branch of the Dis3/RNase II family of nucleases
Daily cycles of reversible protein condensation in cyanobacteria
Quantitative global studies reveal differential translational control by start codon context across the fungal kingdom
riboviz: analysis and visualization of ribosome profiling datasets.
Extremely fast and incredibly close: co-transcriptional splicing in budding yeast
Reversible, specific, active aggregates of endogenous proteins assemble upon heat stress
Dying mRNA tells a story of its life
A nutrient-driven tRNA modification alters translational fidelity and genome-wide protein coding across an animal genus
A Model for the Evolution of Biological Specificity: a Cross-Reacting DNA-Binding Protein Causes Plasmid Incompatibility
Estimating selection on synonymous codon usage from noisy experimental data

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